- Baldwin, Parsonage Cove, Hempstead Bay
- Barren Island, Rockaway Inlet
- Bay Park, Hewlett Bay
- Bay Shore, Watchogue Creek Entrance
- Biltmore Shores, South Oyster Bay
- Cold Spring Harbor
- College Point, Flushing Bay
- Democrat Point, Fire Island Inlet
- East Rockaway Inlet, Atlantic Beach
- Freeport, Baldwin Bay
- Glen Cove, Hempstead Harbor
- Gowanus Bay
- Great Kills Harbor
- Harry Tappen Marina, Hempstead Harbor
- Jones Inlet (Point Lookout)
- Kingsborough, Sheepshead Bay
- Lloyd Harbor, Huntington Bay
- Mattituck Inlet
- Montauk Harbor entrance
- Montauk, Fort Pond Bay
- Moriches Inlet
- Mount Sinai Harbor
- North Channel Bridge, Grassy Bay
- Northport, Northport Bay
- Norton Point, Gravesend Bay
- Norton Point, Head of Bay
- Noyack Bay
- Oyster Bay Harbor
- Plum Gut Harbor, Plum Island
- Point Lookout (marina), Jones Inlet
- Port Jefferson Harbor entrance
- Port Washington, Manhasset Bay
- Princes Bay
- Sag Harbor
- Shinnecock Bay entrance
- Shinnecock Inlet (ocean)
- Smith Point Bridge, Narrow Bay
- Threemile Harbor entrance, Gardiners Bay
- Wallabout Bay, Brooklyn Navy Yard
- Woodmere, Brosewere Bay
- Worlds Fair Marina, Flushing Bay
Looking for another state? See the full inlet directory.